DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and CPK7

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_568281.1 Gene:CPK7 / 831123 AraportID:AT5G12480 Length:535 Species:Arabidopsis thaliana


Alignment Length:328 Identity:105/328 - (32%)
Similarity:166/328 - (50%) Gaps:30/328 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SRNGTFVNNEKIGTNRMRILKNDDVISLSHPTYKAFVFKDLSPNESIGLPEEINKTYYVNRKLGS 182
            ::|..|.:||...|:|            |...:|..|.||.:.:       :|:..|.:.|::|.
plant    22 NKNNPFYSNEYATTDR------------SGAGFKLSVLKDPTGH-------DISLQYDLGREVGR 67

  Fly   183 GAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNL-SHPCVVRMHDI 246
            |.:|:..|..|..|.:::|.|.:.|..|   |.:.:..|   |..|.:|||:: .||.||.:.|.
plant    68 GEFGITYLCTDKETGEKYACKSISKKKL---RTAVDIED---VRREVEIMKHMPKHPNVVSLKDS 126

  Fly   247 VDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLL 311
            .:..|:|::|:|...||:|.:||::....:|..:......:...|:..|.:|:.||||||:|.|.
plant   127 FEDDDAVHIVMELCEGGELFDRIVARGHYTERAAAAVMKTIVEVVQICHKQGVMHRDLKPENFLF 191

  Fly   312 ETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTC 376
            ....|.:.||..|||||.|.:.......:.|:|.|:|||||    |..|..::|:||.||:|:..
plant   192 ANKKETSALKAIDFGLSVFFKPGEQFNEIVGSPYYMAPEVL----RRNYGPEIDVWSAGVILYIL 252

  Fly   377 LSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWL 441
            |.|..||..|.....||.|.:....:....|..||..||.|:.:||..||::|.:...||:.:|:
plant   253 LCGVPPFWAETEQGVAQAIIRSVIDFKRDPWPRVSDSAKDLVRKMLEPDPKKRLTAAQVLEHTWI 317

  Fly   442 RDA 444
            .:|
plant   318 LNA 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718 10/39 (26%)
STKc_Chk2 167..441 CDD:270986 92/274 (34%)
CPK7NP_568281.1 STKc_CAMK 58..316 CDD:270687 91/267 (34%)
FRQ1 365..499 CDD:444056
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.