DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and AT4G16970

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_193430.3 Gene:AT4G16970 / 827405 AraportID:AT4G16970 Length:889 Species:Arabidopsis thaliana


Alignment Length:550 Identity:96/550 - (17%)
Similarity:151/550 - (27%) Gaps:256/550 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 SRNGTFVNNEKIGTNRMRILKNDDVISLSHPTYKAFVFKDLSPNESIGLPEEINKTYYVNRKLGS 182
            :|....:...|...|.:|:....|  ...|.|...|                  .:|.:..:.||
plant   365 TRKSKVIQKRKQNFNTVRLKDQKD--QAKHNTIPDF------------------DSYTIVEEEGS 409

  Fly   183 GAYGLVRLVYDTRTCQQFAMK-----IVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHPCVVR 242
            |.||:|..........:||:|     ..|..:.:..|....|...:.::.....:||....|::.
plant   410 GGYGIVYKATRKTDGTEFAIKCPHVGAQKYYVNNEIRMLERFGGKNCIIKHEGCLKNGDSDCIIL 474

  Fly   243 MHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMC--HAVKYLHDRGITHRDLK 305
            .|...|:|||             |.|.|       |:.:|.:|..|  .|:..||.:|:.|||:|
plant   475 EHLEHDRPDS-------------LKREI-------DVYQLQWYGYCMFKALSSLHKQGVVHRDVK 519

  Fly   306 PDNVLL--ETN----------------------------------DEETLLKVSDF---GLSKFV 331
            |.|.|.  :||                                  ...||:|..|.   |.:|..
plant   520 PGNFLFSRKTNKGYLIDFNLAMDLHQKYRRADKSKAASGLPTASKKHHTLVKSLDAVNRGTNKPS 584

  Fly   332 QK--------------------------------------------------------------- 333
            ||                                                               
plant   585 QKTLAPNSIKKAAGKTRARNDMTRWERLNSQGAEGSGLTSAKDVTSTRNNPSGEKRREPLPCHGR 649

  Fly   334 -------------------------DSVMRTLCGTP-------LYVAPEVLITGGRE-------- 358
                                     .|:.:.:...|       ||:.|..|.:.||.        
plant   650 KALLDFLQETMSVPIPNHEVSSKAPTSMRKRVAALPGKAEKELLYLTPMPLCSNGRPEAGDVIEK 714

  Fly   359 -----AYTK----------------KVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIK------ 396
                 :.||                |:|:||.||.|...:.|..||:   |.| .|.||      
plant   715 KDGPCSGTKGFRAPEVCFRSLHQGPKIDVWSAGVTLLYLIMGRTPFT---GDP-EQNIKDIAQLR 775

  Fly   397 -----------------------KGRFAYGHP--SWKSVSQRAKL-----------LINQMLIVD 425
                                   :.|:..|..  .|..::.:.:.           |:::.|.|:
plant   776 GSEELWEVAKLHNRESSFPKELYESRYLKGMELRKWCELNTKRREFLDVIPLSLLDLVDKCLTVN 840

  Fly   426 PERRPSIDDVLQSSWLRDAPMLQKAKRLMK 455
            |.||.|.:|.|:..:........:.:.|:|
plant   841 PRRRISAEDALKHDFFHPVHETLRNQMLLK 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 8/37 (22%)
STKc_Chk2 167..441 CDD:270986 86/485 (18%)
S_TKc 174..441 CDD:214567 86/478 (18%)
AT4G16970NP_193430.3 PKc_like 401..856 CDD:304357 86/478 (18%)
S_TKc 401..856 CDD:214567 86/478 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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