DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and CIPK3

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_850095.2 Gene:CIPK3 / 817240 AraportID:AT2G26980 Length:451 Species:Arabidopsis thaliana


Alignment Length:297 Identity:101/297 - (34%)
Similarity:165/297 - (55%) Gaps:30/297 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LSPNESIGLPEEINK---------TYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGA 213
            |.||:.:   .|:|:         .|.|.|.:|.|.:..|:...::.|.:..|:||:.|..:...
plant     2 LIPNKKL---REMNRRQQVKRRVGKYEVGRTIGEGTFAKVKFARNSETGEPVALKILDKEKVLKH 63

  Fly   214 RPSTNFSDPDRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSED 278
            :.:      :::..|...||.:.||.||::::::.....::::||::.||:|.::|:::..:.||
plant    64 KMA------EQIRREIATMKLIKHPNVVQLYEVMASKTKIFIILEYVTGGELFDKIVNDGRMKED 122

  Fly   279 ISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKF---VQKDSVMRTL 340
            .::.||.|:.|||.|.|.||:.||||||:|:||::...   ||:||||||..   |:.|.::.|.
plant   123 EARRYFQQLIHAVDYCHSRGVYHRDLKPENLLLDSYGN---LKISDFGLSALSQQVRDDGLLHTS 184

  Fly   341 CGTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHP 405
            ||||.|||||||...|.:..|  .|:||.||||:..|:|.|||.|.......::|..|.|  ..|
plant   185 CGTPNYVAPEVLNDRGYDGAT--ADMWSCGVVLYVLLAGYLPFDDSNLMNLYKKISSGEF--NCP 245

  Fly   406 SWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWLR 442
            .|.|:.  |..||.::|..:|..|.:..:|.:..|.:
plant   246 PWLSLG--AMKLITRILDPNPMTRVTPQEVFEDEWFK 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 97/285 (34%)
S_TKc 174..441 CDD:214567 95/269 (35%)
CIPK3NP_850095.2 STKc_SnRK3 23..278 CDD:271133 95/269 (35%)
S_TKc 24..279 CDD:214567 95/269 (35%)
CIPK_C 323..432 CDD:213380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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