DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and Gak

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_112292.1 Gene:Gak / 81659 RGDID:621589 Length:1305 Species:Rattus norvegicus


Alignment Length:298 Identity:80/298 - (26%)
Similarity:129/298 - (43%) Gaps:64/298 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   176 VNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDR-VLNEAKIMKNLS-HP 238
            |.|.|..|.:..|....|..:.:::|:|          |..:|..:.:| ::.|...:|.|| ||
  Rat    42 VRRVLAEGGFAFVYEAQDLGSGREYALK----------RLLSNEEEKNRAIIQEVCFLKKLSGHP 96

  Fly   239 CVVRM-------HDIVDKPDSVYMVLEFMRGGDL---LNRIISNKLLSEDISKLYFYQMCHAVKY 293
            .:|:.       .:..|...:.:::|..:..|.|   |.|:.....||.|.....|||.|.||::
  Rat    97 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLRRVECKGPLSCDSILKIFYQTCRAVQH 161

  Fly   294 LHDR--GITHRDLKPDNVLLETNDEETLLKVSDFGLSKFV----------QKDSVMR---TLCGT 343
            :|.:  .|.|||||.:|:||   ..:..:|:.|||.:..:          ||.:::.   |...|
  Rat   162 MHRQKPPIIHRDLKVENLLL---SNQGTIKLCDFGSATTISHYPDYSWSAQKRAMVEEEITRNTT 223

  Fly   344 PLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSD---------EYGTPAAQQIKKGR 399
            |:|..||::.........:|.|||:||.:|:.......||.|         :|..|    :...|
  Rat   224 PMYRTPEIVDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYSIP----VNDTR 284

  Fly   400 FAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQ 437
            :...|.           ||..||.|:||.|.||.:|::
  Rat   285 YTVFHD-----------LIRGMLKVNPEERLSIAEVVR 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 80/298 (27%)
S_TKc 174..441 CDD:214567 80/298 (27%)
GakNP_112292.1 STKc_GAK 39..320 CDD:270938 80/298 (27%)
S_TKc 41..311 CDD:214567 80/296 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 332..354
PTEN_C2 568..706 CDD:287393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 747..856
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1141
DnaJ <1253..1298 CDD:99751
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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