DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and Prkd3

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001164475.1 Gene:Prkd3 / 75292 MGIID:1922542 Length:890 Species:Mus musculus


Alignment Length:297 Identity:99/297 - (33%)
Similarity:167/297 - (56%) Gaps:22/297 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 KDLSPNESIGLPE-----EINKTY--YVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGA 213
            |||:.:.|:...:     :|:..|  :.:..||||.:|:|......:|.:..|:|::.|......
Mouse   551 KDLATSISVSNCQVQENVDISSVYQIFADEVLGSGQFGIVYGGKHRKTGRDVAIKVIDKMRFPTK 615

  Fly   214 RPSTNFSDPDRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNK--LLS 276
            :.|       ::.||..|::||.||.:|.:..:.:.|:.|::|:|.:. ||:|..|:|::  .|.
Mouse   616 QES-------QLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GDMLEMILSSEKSRLP 672

  Fly   277 EDISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLC 341
            |.|:|....|:..|::.||.:.|.|.||||:||||.:.:....:|:.|||.::.:.:.|..|::.
Mouse   673 ERITKFMVTQILVALRNLHFKNIVHCDLKPENVLLASAEPFPQVKLCDFGFARIIGEKSFRRSVV 737

  Fly   342 GTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPS 406
            |||.|:|||||.:.|   |.:.:|:||:||:::..||||.||:::  .....||:...|.|....
Mouse   738 GTPAYLAPEVLRSKG---YNRSLDMWSVGVIVYVSLSGTFPFNED--EDINDQIQNAAFMYPPNP 797

  Fly   407 WKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWLRD 443
            |:.:|..|..|||.:|.|...:|.|:|..|...||:|
Mouse   798 WREISSEAIDLINNLLQVKMRKRYSVDKSLSHPWLQD 834

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 99/297 (33%)
STKc_Chk2 167..441 CDD:270986 92/282 (33%)
S_TKc 174..441 CDD:214567 91/270 (34%)
Prkd3NP_001164475.1 C1_1 155..204 CDD:278556
C1 272..321 CDD:237996
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..370
PH_PKD 410..534 CDD:269945
PH 417..531 CDD:278594
STKc_PKD 572..831 CDD:270984 91/271 (34%)
S_TKc 580..832 CDD:214567 90/264 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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