DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and Dclk2

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001344389.1 Gene:Dclk2 / 70762 MGIID:1918012 Length:772 Species:Mus musculus


Alignment Length:297 Identity:96/297 - (32%)
Similarity:157/297 - (52%) Gaps:28/297 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   158 LSP--------NESIGLPEEINKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGAR 214
            |||        :||..|.|:    |.:.:.:|.|.:.:|:...|..|.::||:||:.|....|..
Mouse   389 LSPEGVNGNRCSESFPLLEK----YRIGKVIGDGNFAVVKECVDRYTGKEFALKIIDKAKCCGKE 449

  Fly   215 PSTNFSDPDRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDI 279
                    ..:.||..|::.:.||.::.:.:.::....:::|:|.::||||.:.|.|:...:|..
Mouse   450 --------HLIENEVSILRRVKHPNIIMLVEEMETATDLFLVMELVKGGDLFDAITSSTKYTERD 506

  Fly   280 SKLYFYQMCHAVKYLHDRGITHRDLKPDNVLL-ETNDEETLLKVSDFGLSKFVQKDSVMRTLCGT 343
            .....|.:.:|::|||...|.|||:||:|:|: |..|....||:.||||:..|  :..:.|:|||
Mouse   507 GSAMVYNLANALRYLHSLSIVHRDIKPENLLVCEYPDGTKSLKLGDFGLATVV--EGPLYTVCGT 569

  Fly   344 PLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYG--TPAAQQIKKGRFAYGHPS 406
            |.|||||::...|   |..|||:|:.||:.:..|.|..||..|..  .....||..|:..:..|.
Mouse   570 PTYVAPEIIAETG---YGLKVDVWAAGVITYILLCGFPPFRSENNLQEDLFDQILAGKLEFPAPY 631

  Fly   407 WKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWLRD 443
            |.:::..||.||:|||.|:.|.|.:..::|...|:.|
Mouse   632 WDNITDSAKELISQMLQVNVEARCTAGEILSHPWVSD 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 88/276 (32%)
S_TKc 174..441 CDD:214567 87/269 (32%)
Dclk2NP_001344389.1 DCX 67..157 CDD:214711
DCX 191..279 CDD:214711
PKc_like 407..665 CDD:328722 88/274 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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