DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and PSKH1

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_006733.1 Gene:PSKH1 / 5681 HGNCID:9529 Length:424 Species:Homo sapiens


Alignment Length:275 Identity:93/275 - (33%)
Similarity:158/275 - (57%) Gaps:16/275 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 INKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVL-NEAKIMK 233
            :...|.:...:|.|::..|..|....|.|.:|:|:::          |.:.:...|. :|.::::
Human    94 VTAKYDIKALIGRGSFSRVVRVEHRATRQPYAIKMIE----------TKYREGREVCESELRVLR 148

  Fly   234 NLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDRG 298
            .:.|..::::.::.:..:.||||:|...||:|.:|||:....:|..:......:...|:|||..|
Human   149 RVRHANIIQLVEVFETQERVYMVMELATGGELFDRIIAKGSFTERDATRVLQMVLDGVRYLHALG 213

  Fly   299 ITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQK--DSVMRTLCGTPLYVAPEVLITGGREAYT 361
            ||||||||:|:|......::.:.::||||:...:|  |.:|:|.||||.|:|||||:   |:.||
Human   214 ITHRDLKPENLLYYHPGTDSKIIITDFGLASARKKGDDCLMKTTCGTPEYIAPEVLV---RKPYT 275

  Fly   362 KKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDP 426
            ..||:|:|||:.:..||||:||.|:..|...:||.:|:::|....|.|||..||..|:::|.|||
Human   276 NSVDMWALGVIAYILLSGTMPFEDDNRTRLYRQILRGKYSYSGEPWPSVSNLAKDFIDRLLTVDP 340

  Fly   427 ERRPSIDDVLQSSWL 441
            ..|.:....|:..|:
Human   341 GARMTALQALRHPWV 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 92/273 (34%)
S_TKc 174..441 CDD:214567 92/269 (34%)
PSKH1NP_006733.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 56..80
STKc_PSKH1 96..355 CDD:270989 92/271 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 378..407
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2971
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.