DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and camk4

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001017607.1 Gene:camk4 / 550270 ZFINID:ZDB-GENE-050417-76 Length:364 Species:Danio rerio


Alignment Length:308 Identity:99/308 - (32%)
Similarity:163/308 - (52%) Gaps:25/308 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EEINKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIM 232
            |.:...|.:..:||.||..:|.......|.:.:|:|::||.:           |...|..|..::
Zfish    23 ETLADFYELESELGRGATSVVYRCRQKGTQKHYAVKMLKKTV-----------DKKIVRTEIGVL 76

  Fly   233 KNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDR 297
            ..||||.::::.:|.:.|..:.:|||.:.||:|.:|::.....||..:.....|:..||.|||:.
Zfish    77 LRLSHPNIIKLKEIFETPAEISLVLELVTGGELFDRVVEKGYYSERDAADAVKQVLEAVAYLHEN 141

  Fly   298 GITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGRE-AYT 361
            |:.||||||:|:|..|:..:..||::||||||.|.....|:|:||||.|.|||:|    |. ||.
Zfish   142 GVVHRDLKPENLLYATSAPDAPLKIADFGLSKIVDDQVTMKTVCGTPGYCAPEIL----RGCAYG 202

  Fly   362 KKVDIWSLGVVLFTCLSGTLPFSDEYGTP-AAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVD 425
            .:||:||:||:.:..|.|..||.|:.|.. ..::|....:.:..|.|.:||..||.|:.::::.|
Zfish   203 PEVDMWSVGVITYILLCGFEPFFDDRGDQYMFKRILNCEYEFVSPWWDNVSLNAKDLVKKLIVQD 267

  Fly   426 PERRPSIDDVLQSSWLRDAPMLQKAKRLMKLDGMEIEEENFLEPPTKR 473
            |::|.:....||..|:        ..:.:....|:..::..||...:|
Zfish   268 PKKRLTTQQALQHPWV--------TGKAVNFTHMDTAQKKLLEFNARR 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718
STKc_Chk2 167..441 CDD:270986 94/274 (34%)
camk4NP_001017607.1 STKc_CaMKIV 25..318 CDD:270987 98/306 (32%)
Blue background indicates that the domain is not in the aligned region.

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