DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and pskh1

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001017030.1 Gene:pskh1 / 549784 XenbaseID:XB-GENE-947381 Length:416 Species:Xenopus tropicalis


Alignment Length:368 Identity:110/368 - (29%)
Similarity:190/368 - (51%) Gaps:45/368 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PEKILTR--ISKVHFIIKRANCELTNPVYIQDLSRNGTFVNNEKIGTNRMRILKNDDV---ISLS 146
            |.|.|.:  :.||...:.|.:.:..|  .|.|.|:  ||:.::.:..:    |.|.|:   :..:
 Frog    12 PSKNLQQDLVKKVEPCLDRKSDQYNN--CITDKSQ--TFLKDDYLSHS----LPNGDLKCHVESA 68

  Fly   147 H------PTYKAFVFKDLSPNESIGLPEEINKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIV 205
            |      ..|:|    ...|        .:...|.:...:|.|::..|..|....:.|.:|:|::
 Frog    69 HLRRHKIAKYRA----KFDP--------RVTAKYDIKALIGRGSFSRVVRVEHKASKQPYAIKMI 121

  Fly   206 KKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRII 270
            :.....|.....         :|..:::.:.|..::::.::.:..:.||||:|...||:|.:|||
 Frog   122 ETKCREGREVCE---------SELNVLRRVRHTNIIQLIEVFESQERVYMVMELATGGELFDRII 177

  Fly   271 SNKLLSEDISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQK-- 333
            :....:|..:......:...|||||..|||||||||:|:|......::.:.::||||:...:|  
 Frog   178 TKGSFTERDATHVLQMVLEGVKYLHALGITHRDLKPENLLYYHPGIDSKIMITDFGLASAQKKGD 242

  Fly   334 DSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKG 398
            |.:|:|.||||.|:|||||:   |:.||..||:|:|||:.:..||||:||.|:..|...:||.:|
 Frog   243 DCLMKTTCGTPEYIAPEVLV---RKPYTNSVDMWALGVISYILLSGTMPFEDDNRTRLYRQILRG 304

  Fly   399 RFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWL 441
            :::|....|.|||..||..|:::|:|:|.:|.:....|:..|:
 Frog   305 KYSYSGEPWPSVSNLAKDFIDRLLMVEPGQRMTATHALKHPWI 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 18/79 (23%)
STKc_Chk2 167..441 CDD:270986 90/275 (33%)
S_TKc 174..441 CDD:214567 90/268 (34%)
pskh1NP_001017030.1 STKc_PSKH1 88..347 CDD:270989 90/270 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2971
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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