DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and CaMKI

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_524622.1 Gene:CaMKI / 43792 FlyBaseID:FBgn0016126 Length:405 Species:Drosophila melanogaster


Alignment Length:303 Identity:102/303 - (33%)
Similarity:163/303 - (53%) Gaps:33/303 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 KDLSP-NESIGLPEEINKTYYVNRKLGSGAYGLVRLVYDTRT-CQQFAMKIVKKNMLSGARPSTN 218
            |||.. |:.:.:.|:    |.::..||:||:..|||.....: .:.||:||:.|..|.|...|..
  Fly    16 KDLKELNKQVSIEEK----YNLHGLLGTGAFSEVRLAESKDSPGEHFAVKIIDKKALKGKEESLE 76

  Fly   219 FSDPDRVLNEAKIMK---------------NLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNR 268
                    ||.::::               .|:||.:|::.:..:....||:|:|.:.||:|.:|
  Fly    77 --------NEIRVLRRFSANHFDGKCLNGTRLTHPNIVQLLETYEDKSKVYLVMELVTGGELFDR 133

  Fly   269 IISNKLLSEDISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQK 333
            |:.....:|..:.....|:..||.|:|::|:.||||||:|:|..:.|:::.:.:||||||| ::.
  Fly   134 IVEKGSYTEKDASHLIRQILEAVDYMHEQGVVHRDLKPENLLYYSPDDDSKIMISDFGLSK-MED 197

  Fly   334 DSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKG 398
            ..:|.|.||||.|||||||   .::.|.|.||:||:||:.:..|.|..||.||.......||.||
  Fly   198 SGIMATACGTPGYVAPEVL---AQKPYGKAVDVWSIGVISYILLCGYPPFYDENDANLFAQILKG 259

  Fly   399 RFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWL 441
            .|.:..|.|..:|:.||..|..::.|..|:|.:....|..:|:
  Fly   260 DFEFDSPYWDEISESAKHFIKNLMCVTVEKRYTCKQALGHAWI 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 102/303 (34%)
STKc_Chk2 167..441 CDD:270986 97/289 (34%)
S_TKc 174..441 CDD:214567 96/282 (34%)
CaMKINP_524622.1 STKc_CaMKI 27..301 CDD:270985 97/289 (34%)
S_TKc 31..302 CDD:214567 96/282 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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