DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and phkg2

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_957256.1 Gene:phkg2 / 393937 ZFINID:ZDB-GENE-040426-825 Length:390 Species:Danio rerio


Alignment Length:281 Identity:94/281 - (33%)
Similarity:148/281 - (52%) Gaps:24/281 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 EEINKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVK-------KNMLSGARPSTNFSDPDRV 225
            :|..:.|.....:|.|...:||......|.|:||:||::       :..|...:.||        
Zfish    18 KEFYQKYDPKEVIGRGVSSVVRRCVHKHTGQEFAVKIIEITAEKMTEQQLEEVKSST-------- 74

  Fly   226 LNEAKIMKNL--SHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMC 288
            |.|..:: ||  .||.::.:.|..:....:::|.:.||.|:|.:.:.....|||..::.....:.
Zfish    75 LKEIHVL-NLVKGHPSIITLIDSYESTAFIFLVFDLMRRGELFDYLTEKVTLSEKETRSMMRALL 138

  Fly   289 HAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVL- 352
            .||:|||...|.||||||:|:||   |::..||:||||.|..:..|..:|.|||||.|:|||:| 
Zfish   139 EAVQYLHALNIVHRDLKPENILL---DDQGHLKLSDFGFSVQLGPDEKLRELCGTPGYLAPEILK 200

  Fly   353 --ITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAK 415
              :....|.|.|:||:|:.||:|||.|:|:.||.........:.|.:||:.:..|.|...|...|
Zfish   201 CSMDETHEGYGKEVDLWACGVILFTLLAGSPPFWHRKQLLMLRMIMEGRYQFSSPEWDDRSDTVK 265

  Fly   416 LLINQMLIVDPERRPSIDDVL 436
            .||:::|:|:|..|.:.:..|
Zfish   266 DLISRLLVVEPTIRLTAEQAL 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 94/281 (33%)
S_TKc 174..441 CDD:214567 93/275 (34%)
phkg2NP_957256.1 STKc_PhKG2 13..291 CDD:271083 94/281 (33%)
Pkinase 24..291 CDD:278497 93/275 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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