DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and chek2

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_005165087.1 Gene:chek2 / 336998 ZFINID:ZDB-GENE-030131-8942 Length:504 Species:Danio rerio


Alignment Length:467 Identity:177/467 - (37%)
Similarity:271/467 - (58%) Gaps:46/467 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TQGTQGTQSQASNIWTQVESQPMEKI-------------VWGRLYGKNIKIKSLGTSSKYRIIYT 56
            |..:||: |..|...:.|::.|::::             |||                  |||..
Zfish    32 TSSSQGS-SSGSGTLSSVDTVPVQELQSIPEDEEEVQPQVWG------------------RIIPL 77

  Fly    57 HSSFSV-DLNNDEFTAGRGEANDLILTLNDLPEK--ILTRISKVHFIIKRANCELTNPVYIQDLS 118
            ...||| :...::::.||.:..|...: |.:.:|  .....||.||.|.|..    |.||::|||
Zfish    78 KQGFSVLNCTENQYSFGRDKRCDYSFS-NSILKKSPYFNTYSKKHFRIFRDE----NLVYLEDLS 137

  Fly   119 RNGTFVNNEKIGTNRMRILKNDDVISLSHPTYKAFVFKDLSPNESIGLPEEINKTYYVNRKLGSG 183
            .|||:|::||:|..:..:|.|:.||:|:...::.|:|.|...::...||.|.:|.|::.||:|:|
Zfish   138 GNGTWVDDEKLGNGKQSLLSNNSVIALAEQKHQVFMFIDKMADDQANLPLEFSKKYHIARKIGTG 202

  Fly   184 AYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHPCVVRMHDIVD 248
            ..|.|:|..:..|.::.|:|.:.|:.......:|..::     .|.:|:|.:.|||:::..|...
Zfish   203 VCGEVKLAIEKETFKKVALKTINKHDFPSIGTATRNAE-----REIEILKKIDHPCLIKTEDFYQ 262

  Fly   249 KPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLLET 313
            ..||.|:|||::.||:|..||.:.|.|.|||:|||||||..||:|||:.||.||||||:||||.:
Zfish   263 TEDSYYIVLEYIEGGELFGRIKAKKKLEEDIAKLYFYQMLKAVEYLHNNGIIHRDLKPENVLLAS 327

  Fly   314 NDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLS 378
            :|:..|:|::||..||.:::.|:|:||||||.||||||........|||.||.|||||:||.||.
Zfish   328 HDDICLIKITDFNQSKILEESSLMKTLCGTPTYVAPEVFTHASTVGYTKAVDYWSLGVLLFICLG 392

  Fly   379 GTLPFSDEYGTPAA-QQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWLR 442
            |..||:.|..|.:. :||..|.:.:....||:||..||.|:.::|:|||::|.|:::.|:..||:
Zfish   393 GYPPFNTECTTMSVREQIINGEYRFIPSQWKNVSNEAKDLVKKLLVVDPQKRLSVEEALEHPWLK 457

  Fly   443 DAPMLQKAKRLM 454
            |..|.|.|.:||
Zfish   458 DDRMRQNANQLM 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 36/119 (30%)
STKc_Chk2 167..441 CDD:270986 120/274 (44%)
S_TKc 174..441 CDD:214567 117/267 (44%)
chek2XP_005165087.1 FHA 72..174 CDD:238017 37/124 (30%)
FHA <73..173 CDD:224630 35/104 (34%)
STKc_Chk2 186..456 CDD:270986 120/274 (44%)
S_TKc 193..456 CDD:214567 117/267 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587896
Domainoid 1 1.000 242 1.000 Domainoid score I2195
eggNOG 1 0.900 - - E1_KOG0615
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38289
Inparanoid 1 1.050 313 1.000 Inparanoid score I2561
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1510589at2759
OrthoFinder 1 1.000 - - FOG0002433
OrthoInspector 1 1.000 - - oto41504
orthoMCL 1 0.900 - - OOG6_101842
Panther 1 1.100 - - LDO PTHR44167
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2971
SonicParanoid 1 1.000 - - X1619
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.790

Return to query results.
Submit another query.