DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and Mapkapk2

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_835203.1 Gene:Mapkapk2 / 289014 RGDID:631362 Length:386 Species:Rattus norvegicus


Alignment Length:316 Identity:96/316 - (30%)
Similarity:164/316 - (51%) Gaps:40/316 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 INKTYYV-NRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMK 233
            |...|.| ::.||.|..|.|..::|.||.|:||:|:::              |..:...|.::..
  Rat    45 ITDDYKVTSQVLGLGINGKVLRIFDKRTQQKFALKMLQ--------------DCPKARREVELHW 95

  Fly   234 NLSHPCVVRMHDIVDKPDSVY-------MVLEFMRGGDLLNRI--ISNKLLSEDISKLYFYQMCH 289
            ..|. |...:| |||..:::|       :|:|.:.||:|.:||  ..::..:|..:......:..
  Rat    96 RASQ-CPHIVH-IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 158

  Fly   290 AVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLIT 354
            |::|||...|.|||:||:|:|..:.....:||::|||.:|.....:.:.|.|.||.|||||||  
  Rat   159 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-- 221

  Fly   355 GGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYG---TPAAQ-QIKKGRFAYGHPSWKSVSQRAK 415
             |.|.|.|..|:|||||:::..|.|..||...:|   :|..: :|:.|::.:.:|.|..||:..|
  Rat   222 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 285

  Fly   416 LLINQMLIVDPERRPSIDDVLQSSWLRDAPMLQK----AKRLMKLD---GMEIEEE 464
            :||..:|..:|.:|.:|.:.:...|:..:..:.:    ..|::|.|   ..:::||
  Rat   286 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKEE 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 90/284 (32%)
S_TKc 174..441 CDD:214567 89/280 (32%)
Mapkapk2NP_835203.1 STKc_MAPKAPK2 47..349 CDD:271072 95/314 (30%)
S_TKc 54..311 CDD:214567 87/275 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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