DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and cmk2

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_594436.1 Gene:cmk2 / 2541982 PomBaseID:SPAC23A1.06c Length:504 Species:Schizosaccharomyces pombe


Alignment Length:385 Identity:117/385 - (30%)
Similarity:170/385 - (44%) Gaps:68/385 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VNNEKIGTNRMRILKNDDV-ISLSHPTYKAFVFKDLSPNESIGLPEEIN-------KTYYVNRKL 180
            :.:.|....|....|:.|| ::.....|.....|    |.:.|..|||.       :.|.:...|
pombe    11 LKHSKSSKGRSNASKSVDVSVNRDVAAYTELAAK----NVNAGGDEEIRVANYPGLEKYQLIENL 71

  Fly   181 GSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHPCVVRMHD 245
            |.||:..|...|.....:..|:|:::|..:       |......|..|..||:.:.|..||.:.|
pombe    72 GDGAFSQVYKAYSIDRKEHVAVKVIRKYEM-------NKKQRQGVFKEVNIMRRVKHKNVVNLFD 129

  Fly   246 IVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHD-RGITHRDLKPDNV 309
            .|:..|..::|:|...||:|.::|::....||::::....|:..|||:||| .||.|||:||:|:
pombe   130 FVETEDFYHLVMELAEGGELFHQIVNFTYFSENLARHIIIQVAEAVKHLHDVCGIVHRDIKPENL 194

  Fly   310 L----------------LETN--DEETLLK-----------VSDFGLSKFVQKDSVMRTLCGTPL 345
            |                ||.|  ||...|:           ::|||.||.|. :|...|.|||..
pombe   195 LFQPIEYLPSQNYTPPSLEPNKLDEGMFLEGIGAGGIGRILIADFGFSKVVW-NSKTATPCGTVG 258

  Fly   346 YVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSV 410
            |.|||::   ..|.|:|.||:|::|.||.|.|.|..||.||.....|.::..|.|.:..|.|..:
pombe   259 YAAPEIV---NDELYSKNVDMWAMGCVLHTMLCGFPPFFDENIKDLASKVVNGEFEFLSPWWDDI 320

  Fly   411 SQRAKLLINQMLIVDPERRPSIDDVLQSSWLRDAPMLQKAKRLMKLDGMEIEEENFLEPP 470
            |..||.||..:|.|||..|..|....|..|::               |.....|||...|
pombe   321 SDSAKDLITHLLTVDPRERYDIHQFFQHPWIK---------------GESKMPENFTYKP 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 6/32 (19%)
STKc_Chk2 167..441 CDD:270986 102/310 (33%)
S_TKc 174..441 CDD:214567 99/296 (33%)
cmk2NP_594436.1 PKc_like 63..351 CDD:304357 99/298 (33%)
S_TKc 65..351 CDD:214567 99/296 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR44167
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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