DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and mek1

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_594908.1 Gene:mek1 / 2541604 PomBaseID:SPAC14C4.03 Length:445 Species:Schizosaccharomyces pombe


Alignment Length:379 Identity:118/379 - (31%)
Similarity:188/379 - (49%) Gaps:48/379 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 VYIQDLSRNGTFVNNEKIGTNRMRILKNDDVISLSHPTYKAFVFKDLSPN----ESIGLPEEINK 172
            ||.:|.|.||||:|:..||.....:|.:.|::.:.|.....|..|..:.|    |..|  |..|.
pombe    99 VYCEDQSSNGTFLNHRLIGKGNSVLLSDGDILDVRHCASFLFQQK
YTTDNDFHHEYAG--ERFNI 161

  Fly   173 TYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSH 237
            |   .|.||.|.:..:.:..|..|..|:|.||:.|..:|..|   .|.|     :|..|::.|.|
pombe   162 T---QRLLGIGGFSRIYMAMDNNTGGQYACKIIDKKKISTKR---FFED-----HEMTILRKLDH 215

  Fly   238 PCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDRGITHR 302
            |.:::::...:.....::..|.:.||||.:.:.....:.|..:....:|:...:||||::.|.||
pombe   216 PNIIKVNMEYNSETQFFIFEEMVTGGDLFSYLTKLGTVPEVTTLFIMFQILQGLKYLHEQNIIHR 280

  Fly   303 DLKPDNVLLETNDEETLLKV--SDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGR-------- 357
            |||.:|:|: .:..:|:.::  :|||:::.:||...:.|..|||.|.|||:....||        
pombe   281 DLKLENILI-ASSSDTIFRIILTDFGVARCMQKGKRLSTFVGTPEYTAPEIQRLKGRSQVEKENS 344

  Fly   358 EAYTKKVDIWSLGVVLFTCLSGTLP-FSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQM 421
            ..|.|:||:|||||::|..|||..| |:|        .:|:.:..:..|.|||||::||.||:.:
pombe   345 SGYGKEVDLWSLGVIMFLLLSGNSPSFAD--------GVKEKQVDFRDPVWKSVSRQAKDLISNL 401

  Fly   422 LIVDPERRPSIDDVLQSSWLRDAPMLQKAKRLMKLDGMEIEEENFLEPPTKRSR 475
            |..:|..|.::...|...|     ..:.:.||.||      .|..:..|.|.||
pombe   402 LKTNPPDRFTVKQCLSHPW-----FARHSSRLTKL------YETRILKPLKHSR 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718 16/45 (36%)
STKc_Chk2 167..441 CDD:270986 89/284 (31%)
mek1NP_594908.1 FHA_MEK1-like 40..143 CDD:438722 15/43 (35%)
STKc_CAMK 163..420 CDD:270687 86/273 (32%)

Return to query results.
Submit another query.