DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and pdk-1

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001024743.1 Gene:pdk-1 / 180475 WormBaseID:WBGene00003965 Length:636 Species:Caenorhabditis elegans


Alignment Length:342 Identity:87/342 - (25%)
Similarity:148/342 - (43%) Gaps:74/342 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 SLSHPTYKAFVFKDLSPNESIGLPEEINKTYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKN 208
            |||..|.:..:.|.:..    |.|:..:..:...:.:|.|||..|....:..|...||:|:::|:
 Worm    43 SLSPVTAEDLIAKSIKE----GCPKRTSNDFMFLQSMGEGAYSQVFRCREVATDAMFAVKVLQKS 103

  Fly   209 MLSGARPSTNFSDPDRVLNEAKIMKNLS-----HPCVVRMHDIVDKPDSVYMVLEFMRGGDL--- 265
            .|:      .....|.::.|..|:..||     ||.|.:::........:|.|:..:..|||   
 Worm   104 YLN------RHQKMDAIIREKNILTYLSQECGGHPFVTQLYTHFHDQARIYFVIGLVENGDLGES 162

  Fly   266 LNRIISNKLLSEDISKLYFYQMCHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGL--- 327
            |....|..:|:   ||.:..::...:::|||..|.|||:||||||::.:..   :.::|||.   
 Worm   163 LCHFGSFDMLT---SKFFASEILTGLQFLHDNKIVHRDMKPDNVLIQKDGH---ILITDFGSAQA 221

  Fly   328 -----------------------------SKFVQKDSV-------MRTLCGTPLYVAPEVLITGG 356
                                         ::|...:.|       ..|..||.|||:||:|..|.
 Worm   222 FGGLQLSQEGFTDANQASSRSSDSGSPPPTRFYSDEEVPEENTARRTTFVGTALYVSPEMLADGD 286

  Fly   357 REAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAY--GHPSWKSVSQRAKLLIN 419
            ....|   |||.||.:||.||:|..||.........::|::..|::  |.|      :.|..:|.
 Worm   287 VGPQT---DIWGLGCILFQCLAGQPPFRAVNQYHLLKRIQELDFSFPEGFP------EEASEIIA 342

  Fly   420 QMLIVDPERRPSIDDVL 436
            ::|:.||..|.:..:::
 Worm   343 KILVRDPSTRITSQELM 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 4/11 (36%)
STKc_Chk2 167..441 CDD:270986 81/319 (25%)
S_TKc 174..441 CDD:214567 80/312 (26%)
pdk-1NP_001024743.1 STKc_PDK1 67..364 CDD:270733 80/314 (25%)
S_TKc 69..364 CDD:214567 80/312 (26%)
PH_PDK1 464..570 CDD:241293
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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