DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and chk-2

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_001024271.1 Gene:chk-2 / 180304 WormBaseID:WBGene00000499 Length:476 Species:Caenorhabditis elegans


Alignment Length:414 Identity:149/414 - (35%)
Similarity:222/414 - (53%) Gaps:40/414 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SVDLNNDEFTAGRGEANDLILTLNDLPEKI----------LTR-ISKVHFIIKRANCELTNPVYI 114
            |:||.:|.|..|||.        :|.|...          |.| |||:.|.|.| :.| |..:|:
 Worm    58 SIDLADDHFVCGRGS--------DDAPTNFNFSQVAKDVGLYRFISKIQFSIDR-DTE-TRRIYL 112

  Fly   115 QDLSRNGTFVNNEKIGTNRMRILKNDDVISLSHPTYKAFVFKDLSPNESIGLPEEINKTYYV-NR 178
            .|.|||||.||.|.||....|.|.|.|:||:..|....||::....:..   |||:.|.|:| :.
 Worm   113 HDHSRNGTLVNQEMIGKGLSRELMNGDLISIGIPALIIFVYESADADHH---PEELTKKYHVTSH 174

  Fly   179 KLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKNLSHPCVVRM 243
            .||.|.:|.|.|.|  :...:..:.|.:.|.....|.|...:....:.||.::||.||||.:|.:
 Worm   175 SLGKGGFGKVLLGY--KKSDRSVVAIKQLNTQFSTRCSRAIAKTRDIRNEVEVMKKLSHPNIVAI 237

  Fly   244 HDIVDKPDSVYMVLEFMRGGDLLNRIISNKL----LSEDISKLYFYQMCHAVKYLHDRGITHRDL 304
            :|.:......|||:|::.||:..::::.:|.    |.|.:.|.:.:|:..|:.|||..||.|||:
 Worm   238 YDWITVAKYSYMVIEYVGGGEFFSKVVDSKYNRMGLGESLGKYFAFQLIDAILYLHSVGICHRDI 302

  Fly   305 KPDNVLLETNDEETLLKVSDFGLSKFVQKDSV--MRTLCGTPLYVAPEVLITGGREAYTKKVDIW 367
            ||:|:|.....|..:||::|||::    |:||  |:|.||||.|.|||::...|.| ||.|||||
 Worm   303 KPENILCSDKAERCILKLTDFGMA----KNSVNRMKTRCGTPSYNAPEIVANEGVE-YTPKVDIW 362

  Fly   368 SLGVVLFTCLSGTLPFSDEY-GTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPS 431
            |||.|||...||..|||:|| .....:|:..||..: |..|:.::...:.:|..||.|:|..|||
 Worm   363 SLGCVLFITFSGYPPFSEEYTDMTMDEQVLTGRLIF-HAQWRRITVETQNMIKWMLTVEPSNRPS 426

  Fly   432 IDDVLQSSWLRDAPMLQKAKRLMK 455
            ..:::.:.|::.|......:.::|
 Worm   427 AVELMSTQWMKCADCRTAKQDILK 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 41/105 (39%)
STKc_Chk2 167..441 CDD:270986 105/281 (37%)
S_TKc 174..441 CDD:214567 101/274 (37%)
chk-2NP_001024271.1 STKc_Chk2 162..436 CDD:270986 105/281 (37%)
S_TKc 176..436 CDD:214567 99/267 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162639
Domainoid 1 1.000 44 1.000 Domainoid score I8338
eggNOG 1 0.900 - - E1_KOG0615
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38289
Inparanoid 1 1.050 234 1.000 Inparanoid score I2158
Isobase 1 0.950 - 0 Normalized mean entropy S1885
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1510589at2759
OrthoFinder 1 1.000 - - FOG0002433
OrthoInspector 1 1.000 - - otm14104
orthoMCL 1 0.900 - - OOG6_101842
Panther 1 1.100 - - LDO PTHR44167
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1619
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.710

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