DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and cmk-1

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_500139.1 Gene:cmk-1 / 176989 WormBaseID:WBGene00000553 Length:348 Species:Caenorhabditis elegans


Alignment Length:284 Identity:103/284 - (36%)
Similarity:151/284 - (53%) Gaps:19/284 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SPNESIGLPEEINKTYYVNRKLGSGAYGLVRLVYDTRTC-QQFAMKIVKKNMLSGARPSTNFSDP 222
            :||.:      |.:.|.....||:||:..|.|....... |.:|:|.:.|..|.|...|..    
 Worm    13 APNAT------IREKYDFRDVLGTGAFSKVFLAESKSDAGQMYAVKCIDKKALKGKEESLE---- 67

  Fly   223 DRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQM 287
                ||.|:::.|.|..:|::.|..|:...||:|:|.:.||:|.:||::....:|..:.....|:
 Worm    68 ----NEIKVLRKLRHNNIVQLFDTYDEKQFVYLVMELVTGGELFDRIVAKGSYTEQDASNLIRQV 128

  Fly   288 CHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVL 352
            ..||.::||.|:.||||||:|:|....||::.:.:||||||| .:...||.|.||||.|||||||
 Worm   129 LEAVGFMHDNGVVHRDLKPENLLYYNQDEDSKIMISDFGLSK-TEDSGVMATACGTPGYVAPEVL 192

  Fly   353 ITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLL 417
               .::.|.|.||:||:||:.:..|.|..||.||.......||.||.:.:..|.|..:|..||..
 Worm   193 ---QQKPYGKAVDVWSIGVIAYILLCGYPPFYDESDANLFAQIIKGEYEFDAPYWDQISDSAKDF 254

  Fly   418 INQMLIVDPERRPSIDDVLQSSWL 441
            |..::..|||.|.:..|.|...|:
 Worm   255 ITHLMCCDPEARFTCQDALSHPWI 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 100/274 (36%)
S_TKc 174..441 CDD:214567 99/267 (37%)
cmk-1NP_500139.1 STKc_CaMKI 18..277 CDD:270985 100/270 (37%)
S_TKc 22..278 CDD:214567 99/267 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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