DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and cmk-1

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_500139.1 Gene:cmk-1 / 176989 WormBaseID:WBGene00000553 Length:348 Species:Caenorhabditis elegans


Alignment Length:284 Identity:103/284 - (36%)
Similarity:151/284 - (53%) Gaps:19/284 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 SPNESIGLPEEINKTYYVNRKLGSGAYGLVRLVYDTRTC-QQFAMKIVKKNMLSGARPSTNFSDP 222
            :||.:      |.:.|.....||:||:..|.|....... |.:|:|.:.|..|.|...|..    
 Worm    13 APNAT------IREKYDFRDVLGTGAFSKVFLAESKSDAGQMYAVKCIDKKALKGKEESLE---- 67

  Fly   223 DRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQM 287
                ||.|:::.|.|..:|::.|..|:...||:|:|.:.||:|.:||::....:|..:.....|:
 Worm    68 ----NEIKVLRKLRHNNIVQLFDTYDEKQFVYLVMELVTGGELFDRIVAKGSYTEQDASNLIRQV 128

  Fly   288 CHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVL 352
            ..||.::||.|:.||||||:|:|....||::.:.:||||||| .:...||.|.||||.|||||||
 Worm   129 LEAVGFMHDNGVVHRDLKPENLLYYNQDEDSKIMISDFGLSK-TEDSGVMATACGTPGYVAPEVL 192

  Fly   353 ITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLL 417
               .::.|.|.||:||:||:.:..|.|..||.||.......||.||.:.:..|.|..:|..||..
 Worm   193 ---QQKPYGKAVDVWSIGVIAYILLCGYPPFYDESDANLFAQIIKGEYEFDAPYWDQISDSAKDF 254

  Fly   418 INQMLIVDPERRPSIDDVLQSSWL 441
            |..::..|||.|.:..|.|...|:
 Worm   255 ITHLMCCDPEARFTCQDALSHPWI 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718
STKc_Chk2 167..441 CDD:270986 100/274 (36%)
cmk-1NP_500139.1 STKc_CaMKI 18..277 CDD:270985 100/270 (37%)
Blue background indicates that the domain is not in the aligned region.

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