DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and Cdk6

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_034003.1 Gene:Cdk6 / 12571 MGIID:1277162 Length:326 Species:Mus musculus


Alignment Length:316 Identity:77/316 - (24%)
Similarity:140/316 - (44%) Gaps:66/316 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NKTYYVNRKLGSGAYGLVRLVYDTRTCQQF-AMKIVKKNMLSGARPSTNFSDPDRVLNEAKIMKN 234
            ::.|....::|.||||.|....|.:...:| |:|.|:........|.:       .:.|..::::
Mouse    10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTSEEGMPLS-------TIREVAVLRH 67

  Fly   235 L---SHPCVVRMHDI-----VDKPDSVYMVLEFMRGGDL---LNRIISNKLLSEDISKLYFYQMC 288
            |   .||.|||:.|:     .|:...:.:|.|.: ..||   |:::....:.:|.|..:.| |:.
Mouse    68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMF-QLL 130

  Fly   289 HAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLI 353
            ..:.:||...:.||||||.|:|:.::.:   :|::||||::.......:.::..|..|.|||||:
Mouse   131 RGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192

  Fly   354 TGGREAYTKKVDIWSLGVV---------LFTCLSGT-----------LPFSDE-----------Y 387
               :.:|...||:||:|.:         ||...|..           ||..::           :
Mouse   193 ---QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDIIGLPGEEDWPRDVALPRQAF 254

  Fly   388 GTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWLRD 443
            .:.:||.|:|  |.      ..:.:..|.|:.:.|..:|.:|.|....|...:.:|
Mouse   255 HSKSAQPIEK--FV------TDIDELGKDLLLKCLTFNPAKRISAYGALNHPYFQD 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 76/312 (24%)
S_TKc 174..441 CDD:214567 76/309 (25%)
Cdk6NP_034003.1 STKc_CDK6 11..300 CDD:270846 76/311 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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