DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and Chek2

DIOPT Version :10

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:NP_446129.1 Gene:Chek2 / 114212 RGDID:621543 Length:545 Species:Rattus norvegicus


Alignment Length:490 Identity:187/490 - (38%)
Similarity:278/490 - (56%) Gaps:56/490 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ARDTQGTQGTQSQASNIWTQ------VESQPME--KIVWGRLYGKNIKIKSLGTSSKYRIIYTHS 58
            ::.:..:.||.|....:.||      .:.:|.|  ...|.||:.                  ...
  Rat    58 SQSSHSSSGTLSSLETVSTQELCSIPEDQEPEEPGPTPWARLWA------------------LQD 104

  Fly    59 SFS-VDLNNDEFTAGRGEANDLILTLNDLP-----EKILTRISKVHFIIKR----ANCELTNPVY 113
            .|| :|..||.:..||.::.:...   |.|     :|..| .||.||.|.|    .||.:   ||
  Rat   105 GFSNLDCVNDNYWFGRDKSCEYCF---DGPLLKRTDKYRT-YSKKHFRIFREMGPKNCYI---VY 162

  Fly   114 IQDLSRNGTFVNNEKIGTNRMRILKNDDVISLSHPTYKAFVFKDLSPNESIGLPEEINKTYYVNR 178
            ::|.|.||||||.|.||..:...|.|:..|:||....|.|||.||:.::....|:|:...|.:::
  Rat   163 LEDHSGNGTFVNTELIGKGKRCPLSNNSEIALSLCRNKVFVFFDLTVDDQSVYPKELRDEYIMSK 227

  Fly   179 KLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSD-PDRVLNEAKIMKNLSHPCVVR 242
            .|||||.|.|::.::.:||::.|:||:.|...  |..|:..:| ...|..|.:|:|.|:|||:::
  Rat   228 TLGSGACGEVKMAFERKTCKKVAIKIISKRRF--ALGSSREADTAPSVETEIEILKKLNHPCIIK 290

  Fly   243 MHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSEDISKLYFYQMCHAVKYLHDRGITHRDLKPD 307
            :.|:.|..| .|:|||.|.||:|.:|::.||.|.|...|||||||..||:|||:.||.||||||:
  Rat   291 IKDVFDVED-YYIVLELMEGGELFDRVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPE 354

  Fly   308 NVLLETNDEETLLKVSDFGLSKFVQKDSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWSLGVV 372
            ||||.:.:|:.|:|::|||.||.:.:.|:||||||||.|:||||||:.|...|::.||.|||||:
  Rat   355 NVLLSSQEEDCLIKITDFGQSKILGETSLMRTLCGTPTYLAPEVLISNGTAGYSRAVDCWSLGVI 419

  Fly   373 LFTCLSGTLPFSDEYGTPAA--QQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDV 435
            ||.||||..||| |:.|..:  .||..|::......|..||::|..|:.::|:|||:.|.:.::.
  Rat   420 LFICLSGYPPFS-EHKTQVSLKDQITSGKYNLIPEVWTDVSEKALDLVKKLLVVDPKARLTTEEA 483

  Fly   436 LQSSWLRDAPMLQKAKRLMKLDGMEIEEENFLEPP 470
            |...||:|..|.:|.:.|:      ::|:|.:..|
  Rat   484 LSHPWLQDEHMKKKFQDLL------VQEKNLVPLP 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA_CHK2 32..158 CDD:438718 44/135 (33%)
STKc_Chk2 167..441 CDD:270986 125/276 (45%)
Chek2NP_446129.1 FHA_CHK2 96..207 CDD:438718 44/135 (33%)
STKc_Chk2 216..489 CDD:270986 125/276 (45%)

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