DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and si:ch73-122k23.1

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_021333767.1 Gene:si:ch73-122k23.1 / 101885338 ZFINID:ZDB-GENE-160113-35 Length:347 Species:Danio rerio


Alignment Length:84 Identity:24/84 - (28%)
Similarity:42/84 - (50%) Gaps:26/84 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   377 LSGTLPFSDEYGTPAAQQIKKGRFAYGHPSWKSVSQRAKLLINQMLIVDPERRPSIDDVLQSSWL 441
            :.||:|...|                      |.|:..:.||:|||..||:.|||.:::|:..:|
Zfish    19 MKGTIPHISE----------------------SYSKELRELISQMLSCDPKDRPSAEEILRRPFL 61

  Fly   442 RDAPMLQKAKRLMKLDGME 460
            |:|  :::.||:.  :|:|
Zfish    62 REA--VKRFKRIP--EGLE 76

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 17/63 (27%)
S_TKc 174..441 CDD:214567 17/63 (27%)
si:ch73-122k23.1XP_021333767.1 PKc_like <19..61 CDD:328722 17/63 (27%)
ApoL 33..297 CDD:310219 18/48 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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