DRSC/TRiP Functional Genomics Resources

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Protein Alignment lok and ephb4

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_031755496.1 Gene:ephb4 / 100497297 XenbaseID:XB-GENE-5881604 Length:945 Species:Xenopus tropicalis


Alignment Length:354 Identity:84/354 - (23%)
Similarity:144/354 - (40%) Gaps:86/354 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 FVFKDLSPNESI-GLPEEIN-KTYYVNRKLGSGAYGLV---RLVYDTRTCQQFAMKIVKKNMLSG 212
            |.::|  |||:: ...:||: ....:...:|:|.:|.|   ||....:.....|:|.:|......
 Frog   594 FTYED--PNEAVREFAKEIDVSCVKIEEVIGAGEFGEVCRGRLKVPGKKENYVAIKTLKGGYTER 656

  Fly   213 ARPSTNFSDPDRVLNEAKIMKNLSHPCVVRMHDIVDKPDSVYMVLEFMRGGDLLNRIISNKLLSE 277
            .|        ...|:||.||...:||.::.:..::.....|.::.|:|..|.|      :..|.:
 Frog   657 QR--------REFLSEASIMGQFNHPNIIHLEGVITNNCPVMIITEYMENGAL------DSFLRQ 707

  Fly   278 DISKLYFYQM-------CHAVKYLHDRGITHRDLKPDNVLLETNDEETLLKVSDFGLSKFVQKDS 335
            :..:....|:       ...::||.:....||||...|:|:.:|   .:.||||||||:|:|:.|
 Frog   708 NDGQFTPIQLVGMLRGIASGMRYLAEMNYVHRDLAARNILVNSN---LVCKVSDFGLSRFLQEGS 769

  Fly   336 VMRTLCG-----TPL-YVAPEVLITGGREAYTKKVDIWSLGVVLFTCLS-GTLPFSD-------- 385
            ...|...     .|: :.|||.:   ....:|...|:|..|:|::..:| |..|:.|        
 Frog   770 TDPTYTSCLGGKIPIRWTAPEAI---AFRKFTSASDVWGYGIVMWEVMSFGERPYWDMSNQDVIN 831

  Fly   386 ----EYGTPA-----------------AQQIKKGRFA---------YGHPSWKSVSQRAKLLINQ 420
                :|..||                 ..:..:.|||         ..:|:...::.|.:|..:|
 Frog   832 AIEQDYRLPAPPDCPTALHQLMLDCWQRDRALRPRFADIVSSLDKLIRNPASLKITTREQLGTSQ 896

  Fly   421 MLIVDPERRP---SIDDVLQSSWLRDAPM 446
            .|:  .:|.|   |...|  |.||:...|
 Frog   897 PLL--DQRTPHYSSFSSV--SEWLQAIKM 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017 1/2 (50%)
STKc_Chk2 167..441 CDD:270986 76/332 (23%)
S_TKc 174..441 CDD:214567 74/324 (23%)
ephb4XP_031755496.1 EphR_LBD_B4 17..196 CDD:198442
fn3 325..417 CDD:394996
fn3 435..520 CDD:394996
EphA2_TM 541..612 CDD:405290 7/19 (37%)
PTKc_EphR_B 610..878 CDD:173638 65/287 (23%)
SAM_superfamily 907..>945 CDD:417767 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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