DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lok and gak

DIOPT Version :9

Sequence 1:NP_477219.1 Gene:lok / 35288 FlyBaseID:FBgn0019686 Length:476 Species:Drosophila melanogaster
Sequence 2:XP_009299488.1 Gene:gak / 100151158 ZFINID:ZDB-GENE-041210-358 Length:1280 Species:Danio rerio


Alignment Length:306 Identity:77/306 - (25%)
Similarity:135/306 - (44%) Gaps:51/306 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 NESIGLPEEINK-TYYVNRKLGSGAYGLVRLVYDTRTCQQFAMKIVKKNMLSGARPSTNFSDPDR 224
            |:.:|...|:.: ...:.|.:..|.:..|....|..:.:.:|:    |.:||.......     .
Zfish    26 NDFVGQVVELGELKLRIKRVIAEGGFAFVYEAQDLGSSKDYAL----KRLLSNEEEKNK-----A 81

  Fly   225 VLNEAKIMKNLS-HPCVVRM-------HDIVDKPDSVYMVL-EFMRGG--DLLNRIISNKLLSED 278
            ::.|...||.|| ||.||:.       .:..|...:.:::| |..||.  |.:.::.....:|.|
Zfish    82 IIQEVCFMKKLSGHPNVVQFCSAASISKEESDTGQAEFLILTELCRGQLVDFVKKVEQKGPMSCD 146

  Fly   279 ISKLYFYQMCHAVKYLHDR--GITHRDLKPDNVLLETNDEETLLKVSDFGLS------------- 328
            .....|||.|.||:::|.:  .:.|||||.:|:|:   ..:..:|:.|||.:             
Zfish   147 TVLKIFYQSCRAVQHMHKQSPAVIHRDLKIENLLI---SHQGTIKLCDFGSATTLAHYPDYSWSA 208

  Fly   329 --KFVQKDSVMRTLCGTPLYVAPEVLITGGREAYTKKVDIWSLGVVLFTCLSGTLPFSDEYGTPA 391
              :.:.:|.:.|..  ||.|..||::.........:|.|||:||.:|:.......||.:    .|
Zfish   209 HKRSMVEDEITRNT--TPAYRTPEMIDLYSNYPINEKQDIWALGCILYLLCFKQHPFEE----GA 267

  Fly   392 AQQIKKGRFAYGHPSWK-SVSQRAKLLINQMLIVDPERRPSIDDVL 436
            ..||..|:::......| :|..:   ||..||.::||.|.||::::
Zfish   268 KLQIVNGKYSIPQNDTKYTVFHQ---LIRSMLKINPEERLSINELV 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lokNP_477219.1 FHA 39..156 CDD:238017
STKc_Chk2 167..441 CDD:270986 75/300 (25%)
S_TKc 174..441 CDD:214567 74/292 (25%)
gakXP_009299488.1 STKc_GAK 39..320 CDD:270938 74/293 (25%)
S_TKc 41..311 CDD:214567 74/291 (25%)
PTEN_C2 566..704 CDD:287393
DnaJ <1228..1273 CDD:99751
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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