DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment barr and Ncaph

DIOPT Version :9

Sequence 1:NP_001286094.1 Gene:barr / 35287 FlyBaseID:FBgn0014127 Length:735 Species:Drosophila melanogaster
Sequence 2:NP_659067.2 Gene:Ncaph / 215387 MGIID:2444777 Length:731 Species:Mus musculus


Alignment Length:832 Identity:207/832 - (24%)
Similarity:329/832 - (39%) Gaps:203/832 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTLPRLET-----------------PLRR----SAVGSYQEGVSRMLT----PFNDDEAERREAR 40
            |.:||.||                 ||.|    |..|....|..:...    |.||||.||.:.|
Mouse     1 MRIPRSETMNSSFLKARGQQDVLSSPLERVPPASRPGKAPLGTPKTPVLEDFPQNDDEKERMQRR 65

  Fly    41 RRTLLQQH------HRSSTLESIEDNETI------------KNCLELYNGNKVSKDNAWNLMLID 87
            |..:....      |.:|...:|:.:.||            ..|::|.:.||::..||:.|.|||
Mouse    66 RSRVFDLQFSTDSIHLASPNRNIDVSTTISKFTNTQITEHYSTCIKLSSENKITTKNAFGLHLID 130

  Fly    88 SLANLLDHHHKRMSNFKMAGSSLEASSKVYGLRVDSIYLDAMRISAGLSARTLTDKQINAAEDDD 152
            .::.:|.......:|||:|..:|:||:|:|.:|||:::.|..|:..||.             .|.
Mouse   131 FMSEILKQKDAEPTNFKVAAGTLDASTKIYAVRVDAVHADVYRVLGGLG-------------KDT 182

  Fly   153 GPQGEQA-TGEGQDSAQQAAKEAAPKPKRQKKPISTVTKNRETLN-SRLDTAPLQDPVFGKLNST 215
            .||||:: :|:|.....:..|:.| |||: |:...|:.:|...:| |..|.....||:|.|..::
Mouse   183 PPQGEESHSGDGSTLETERTKKPA-KPKK-KQSCKTIEQNLSNINVSEADGKCAVDPMFQKTAAS 245

  Fly   216 VGSINASNRLMHNI-LPSFDSELRLRTTYNFWNSEESTE----EVQDHTTLNAEMEQWPATSLMS 275
            ....:.:...:..: ...:.|||...:.....:|.|..|    ...|.|.|.|.::|.       
Mouse   246 FDECSTTGVFLSTLHCQDYRSELLFPSDMQTLSSGEPLELPDLGFVDMTDLEASLQQC------- 303

  Fly   276 TNLMRKLLPHAERSNLRPLHTGYIITSAPNPKSANEKAAEVVQDEDHDEGLDNADDMCVNEISMA 340
                      .|...|.|...|:..|.              ...|.|:|.:....|. ..:....
Mouse   304 ----------VEDRPLCPSLAGFQFTK--------------WDSETHNESVSALVDK-FKKNDQV 343

  Fly   341 FDINAEC----EPMPDLDGPPPLVLEVDSNELEELTA-------------------EEQMVINNC 382
            ||||||.    |.:||    .|||.:...|:..:|:|                   :|:::....
Mouse   344 FDINAEAEDDEEDVPD----GPLVEDFVDNDEPDLSAAGDHEEFRSWKELCQVQSNQEEVISLED 404

  Fly   383 RRLRKQTEFIEDLRPVDGNSKLEYSY---RPMDQISQFWAGPSHWKFKRTRPRSTFSQTNGQVDT 444
            |.::....|: .::|.      ||||   |.|    :.||||.||:| |.||:...:.....   
Mouse   405 RDIQVMCSFL-SMKPG------EYSYFSPRTM----KMWAGPDHWRF-RPRPKQDATSCTEH--- 454

  Fly   445 QPIRTQRAKKSAHLNANRRAKALDYGNVTENFFQQLD-TTIRQRKANFQKKWDPRKLILPTKFEL 508
               :.:.|||...:|.:   ..:|:    :.:||:.. .||..:.....:.|  :...|||.|..
Mouse   455 ---KKKSAKKDFEINFD---DDIDF----DAYFQKTKAATILTKSTLENQNW--KATTLPTDFHY 507

  Fly   509 DPDLFFKYESAPSIKLSKRAGEPDSDEGGDLGIDMDADM-----HHDDDNDQELFNNEHFTDAVP 568
            :.|...:....|                |...:.||.|.     |:::..|.: :||.:.|    
Mouse   508 ETDNLIQLHLKP----------------GKRSLKMDQDQKAKTEHYEEIEDYD-YNNPNDT---- 551

  Fly   569 ANVSVIAAIAAEQAAEASMMNVSAGEIG---------LTQMNA--TCNNTVFEIGTEFE----GA 618
            :|.......|.....||.  ::.|..:|         .||.|.  :..|...:|.|..|    ..
Mouse   552 SNYCPGLQAADSDYEEAD--DLFADPVGTLDLESDPKTTQENGHISPENQGVDITTYQELNLVAE 614

  Fly   619 PSQVAKVIVPFAKRAKVIDMKNLKKSCNSLIQKQLLNAVPEETIPSHPKKKGEHYSKGFASFQQV 683
            |.:|.|:.:.:||.||.:|||.||:|..||:.|  .:....:|..:|.:...|...:..|..:::
Mouse   615 PQKVNKIEIHYAKTAKKMDMKKLKQSMWSLLTK--FSRKEADTEANHTESGQEGAPEEVADEKKL 677

  Fly   684 YQKLPDL---LTTKMSDSLSPSVAFYAVLHLANDLKLRLIPQEDLEDFQIRQ 732
            .....||   |...|:.:||..:||..:|||||:..|:|...|||.|..:.|
Mouse   678 SGLTKDLQTRLPPLMAQNLSIPLAFACLLHLANEKNLKLEGTEDLSDVLVMQ 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
barrNP_001286094.1 Cnd2 7..731 CDD:283450 203/823 (25%)
NcaphNP_659067.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 17/60 (28%)
Cnd2 42..727 CDD:283450 196/787 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..214 14/50 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 652..673 3/20 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850592
Domainoid 1 1.000 143 1.000 Domainoid score I4650
eggNOG 1 0.900 - - E1_COG5229
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H133986
Inparanoid 1 1.050 144 1.000 Inparanoid score I4430
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55639
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004936
OrthoInspector 1 1.000 - - oto94213
orthoMCL 1 0.900 - - OOG6_103100
Panther 1 1.100 - - LDO PTHR13108
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R216
SonicParanoid 1 1.000 - - X3476
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

Return to query results.
Submit another query.