DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment COX4 and MTC3

DIOPT Version :9

Sequence 1:NP_001260612.1 Gene:COX4 / 35279 FlyBaseID:FBgn0032833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_011289.1 Gene:MTC3 / 852626 SGDID:S000003195 Length:123 Species:Saccharomyces cerevisiae


Alignment Length:67 Identity:20/67 - (29%)
Similarity:34/67 - (50%) Gaps:9/67 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 PAVRFREPTNEINA-LRAKEQGDWKKLSTQEIKALYRASF--CQTIAEVQAGSGEWKL-HLGVSL 121
            |.:| .|..:||.. ||.:.|.||:.:..:|.||.|..|:  |..    ::...||.: :.|:.:
Yeast    33 PTLR-PEVRDEIKEYLRWRMQEDWRHIPLEETKAAYFLSYGPCGG----RSKGNEWNVGYTGMRI 92

  Fly   122 LF 123
            :|
Yeast    93 VF 94

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX4NP_001260612.1 COX4 50..181 CDD:281003 20/67 (30%)
MTC3NP_011289.1 Cyt_c_Oxidase_IV 25..>109 CDD:295479 20/67 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4075
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10707
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

Return to query results.
Submit another query.