DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX4 and cox4i2

DIOPT Version :10

Sequence 1:NP_610013.1 Gene:COX4 / 35279 FlyBaseID:FBgn0032833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001016945.1 Gene:cox4i2 / 549699 XenbaseID:XB-GENE-5872512 Length:174 Species:Xenopus tropicalis


Alignment Length:174 Identity:55/174 - (31%)
Similarity:91/174 - (52%) Gaps:8/174 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LRQLASQLPKSAQVG--SVAAVHTLDKIGKREIVGYGWNGTACYADRVDYPLPAVRFR-EPTNEI 72
            ||..::.||::..:|  ||.|.|     |....|.........|.|...:|||.:.:: :.:::.
 Frog     5 LRLRSALLPRTRLLGATSVRAAH-----GHEGQVSRPDGSELLYYDHRVFPLPDIPYQTDLSSQQ 64

  Fly    73 NALRAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIF 137
            .||:.||:|.||:||.::..:|||..|.:|.||:...|.|||...|...:|......:.....::
 Frog    65 GALKDKERGPWKQLSQEDKISLYRIKFNKTYAEMNRPSNEWKTVFGTIFIFFGLTGLIVWWQRVY 129

  Fly   138 VYDELPVTFDEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKWK 181
            ||...|.|..:|.:..|.:|::|:.::|:.|.:|.||||..:||
 Frog   130 VYPPQPHTLADEWKAMQARRMLDMRVSPIQGFSSNWDYEKNQWK 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX4NP_610013.1 Cyt_c_Oxidase_IV 40..175 CDD:238462 40/135 (30%)
cox4i2NP_001016945.1 Cyt_c_Oxidase_IV 31..167 CDD:238462 40/135 (30%)

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