DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX4 and cox4i1

DIOPT Version :10

Sequence 1:NP_610013.1 Gene:COX4 / 35279 FlyBaseID:FBgn0032833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_001016479.1 Gene:cox4i1 / 549233 XenbaseID:XB-GENE-953648 Length:169 Species:Xenopus tropicalis


Alignment Length:167 Identity:57/167 - (34%)
Similarity:89/167 - (53%) Gaps:23/167 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LDKIGKREIVGYGWNGTAC-----------------YADRVDYPLPAVRFREP-TNEINALRAKE 79
            |..:|:|.:     :.:||                 |.||.:.|||.:.|.|. ::|..||:.||
 Frog     7 LSLVGRRAL-----STSACLQGHAAVVKPETYSLPVYVDRRNVPLPDIAFVETLSSEQKALKEKE 66

  Fly    80 QGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIFVYDELPV 144
            :|.|..||.:|...|||..|.::.:|:..||.|||..||.:|.|.....:|.:....:||.::|.
 Frog    67 KGTWASLSAKEKLELYRIKFQESYSEMNQGSSEWKTILGGTLFFIGFTAFVILWQRKYVYGDVPH 131

  Fly   145 TFDEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKWK 181
            ||.::....|.:|::|:.|||:.|.:|||||:..:||
 Frog   132 TFSDDWVAKQAKRMLDMRINPIQGFSSKWDYDKNEWK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX4NP_610013.1 Cyt_c_Oxidase_IV 40..175 CDD:238462 50/152 (33%)
cox4i1NP_001016479.1 Cyt_c_Oxidase_IV 27..162 CDD:238462 48/134 (36%)

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