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Protein Alignment COX4 and cox4i1
DIOPT Version :9
Sequence 1: | NP_001260612.1 |
Gene: | COX4 / 35279 |
FlyBaseID: | FBgn0032833 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001016479.1 |
Gene: | cox4i1 / 549233 |
XenbaseID: | XB-GENE-953648 |
Length: | 169 |
Species: | Xenopus tropicalis |
Alignment Length: | 167 |
Identity: | 57/167 - (34%) |
Similarity: | 89/167 - (53%) |
Gaps: | 23/167 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 33 LDKIGKREIVGYGWNGTAC-----------------YADRVDYPLPAVRFREP-TNEINALRAKE 79
|..:|:|.: :.:|| |.||.:.|||.:.|.|. ::|..||:.||
Frog 7 LSLVGRRAL-----STSACLQGHAAVVKPETYSLPVYVDRRNVPLPDIAFVETLSSEQKALKEKE 66
Fly 80 QGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIFVYDELPV 144
:|.|..||.:|...|||..|.::.:|:..||.|||..||.:|.|.....:|.:....:||.::|.
Frog 67 KGTWASLSAKEKLELYRIKFQESYSEMNQGSSEWKTILGGTLFFIGFTAFVILWQRKYVYGDVPH 131
Fly 145 TFDEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKWK 181
||.::....|.:|::|:.|||:.|.:|||||:..:||
Frog 132 TFSDDWVAKQAKRMLDMRINPIQGFSSKWDYDKNEWK 168
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
COX4 | NP_001260612.1 |
COX4 |
50..181 |
CDD:281003 |
52/148 (35%) |
cox4i1 | NP_001016479.1 |
COX4 |
36..168 |
CDD:367258 |
50/131 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
109 |
1.000 |
Domainoid score |
I6266 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
109 |
1.000 |
Inparanoid score |
I4745 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1591226at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002054 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm9486 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X922 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 6.060 |
|
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