DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX4 and cox4i1

DIOPT Version :10

Sequence 1:NP_610013.1 Gene:COX4 / 35279 FlyBaseID:FBgn0032833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_999866.1 Gene:cox4i1 / 326975 ZFINID:ZDB-GENE-030131-5175 Length:169 Species:Danio rerio


Alignment Length:159 Identity:61/159 - (38%)
Similarity:91/159 - (57%) Gaps:13/159 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IGKR----EIVGYGWNGTA--------CYADRVDYPLPAVRF-REPTNEINALRAKEQGDWKKLS 87
            :|||    .|...|.:|.|        .|.||.:.|||.::| ::.:.:..:|:.||:|.|..||
Zfish    10 VGKRALSTSICLRGAHGVAKVEDYSLPAYFDRRESPLPEIKFVQQLSADQKSLKEKEKGSWAALS 74

  Fly    88 TQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIFVYDELPVTFDEEHQK 152
            .:|..||||.||.::.||:..||||||..:.....|......|.:....:||.::|.|||.|:::
Zfish    75 KEEKIALYRISFKESFAEMNQGSGEWKSVVAGIFFFVGLTGLVVLWQRKYVYGDVPNTFDPEYKQ 139

  Fly   153 AQLQRIIDLEINPVTGLTSKWDYENKKWK 181
            .::||::|:.||||.|..:||||||..||
Zfish   140 KEIQRMLDMRINPVQGFAAKWDYENNAWK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX4NP_610013.1 Cyt_c_Oxidase_IV 40..175 CDD:238462 52/143 (36%)
cox4i1NP_999866.1 Cyt_c_Oxidase_IV 26..162 CDD:238462 50/135 (37%)

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