DRSC/TRiP Functional Genomics Resources

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Protein Alignment COX4 and cox4i1

DIOPT Version :9

Sequence 1:NP_001260612.1 Gene:COX4 / 35279 FlyBaseID:FBgn0032833 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_999866.1 Gene:cox4i1 / 326975 ZFINID:ZDB-GENE-030131-5175 Length:169 Species:Danio rerio


Alignment Length:159 Identity:61/159 - (38%)
Similarity:91/159 - (57%) Gaps:13/159 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IGKR----EIVGYGWNGTA--------CYADRVDYPLPAVRF-REPTNEINALRAKEQGDWKKLS 87
            :|||    .|...|.:|.|        .|.||.:.|||.::| ::.:.:..:|:.||:|.|..||
Zfish    10 VGKRALSTSICLRGAHGVAKVEDYSLPAYFDRRESPLPEIKFVQQLSADQKSLKEKEKGSWAALS 74

  Fly    88 TQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIFVYDELPVTFDEEHQK 152
            .:|..||||.||.::.||:..||||||..:.....|......|.:....:||.::|.|||.|:::
Zfish    75 KEEKIALYRISFKESFAEMNQGSGEWKSVVAGIFFFVGLTGLVVLWQRKYVYGDVPNTFDPEYKQ 139

  Fly   153 AQLQRIIDLEINPVTGLTSKWDYENKKWK 181
            .::||::|:.||||.|..:||||||..||
Zfish   140 KEIQRMLDMRINPVQGFAAKWDYENNAWK 168

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
COX4NP_001260612.1 COX4 50..181 CDD:281003 53/139 (38%)
cox4i1NP_999866.1 COX4 36..168 CDD:281003 52/131 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170585956
Domainoid 1 1.000 113 1.000 Domainoid score I6082
eggNOG 1 0.900 - - E1_KOG4075
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 113 1.000 Inparanoid score I4826
OMA 1 1.010 - - QHG48902
OrthoDB 1 1.010 - - D1591226at2759
OrthoFinder 1 1.000 - - FOG0002054
OrthoInspector 1 1.000 - - mtm6589
orthoMCL 1 0.900 - - OOG6_103849
Panther 1 1.100 - - O PTHR10707
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4386
SonicParanoid 1 1.000 - - X922
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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