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Protein Alignment COX4 and Cox4i1
DIOPT Version :9
Sequence 1: | NP_001260612.1 |
Gene: | COX4 / 35279 |
FlyBaseID: | FBgn0032833 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_058898.1 |
Gene: | Cox4i1 / 29445 |
RGDID: | 68374 |
Length: | 169 |
Species: | Rattus norvegicus |
Alignment Length: | 171 |
Identity: | 57/171 - (33%) |
Similarity: | 85/171 - (49%) |
Gaps: | 23/171 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 AVHTLDKIGKREIVGYGWNGTAC-----------------YADRVDYPLPAV-RFREPTNEINAL 75
|...|..||||.| :.:.| |.||.|||||.| ..:..:....||
Rat 3 ATRALSLIGKRAI-----STSVCLRAHGSVVKSEDYALPSYVDRRDYPLPDVAHVKLLSASQKAL 62
Fly 76 RAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNIFVYD 140
:.||:.||..||..|...|||..|.::.||:..|:.|||..:|:::.|......|.:....:||.
Rat 63 KEKEKADWSSLSRDEKVQLYRIQFNESFAEMNKGTNEWKTVVGLAMFFIGFTALVLIWEKSYVYG 127
Fly 141 ELPVTFDEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKWK 181
.:|.|||.:....|.:|::|:::||:.|.::||||...:||
Rat 128 PIPHTFDRDWVAMQTKRMLDMKVNPIQGFSAKWDYNKNEWK 168
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
COX4 | NP_001260612.1 |
COX4 |
50..181 |
CDD:281003 |
48/148 (32%) |
Cox4i1 | NP_058898.1 |
COX4 |
36..168 |
CDD:397197 |
47/131 (36%) |
Information from Original Tools:
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