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Protein Alignment COX4 and Cox4i1
DIOPT Version :9
Sequence 1: | NP_001260612.1 |
Gene: | COX4 / 35279 |
FlyBaseID: | FBgn0032833 |
Length: | 182 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_034071.2 |
Gene: | Cox4i1 / 12857 |
MGIID: | 88473 |
Length: | 206 |
Species: | Mus musculus |
Alignment Length: | 175 |
Identity: | 59/175 - (33%) |
Similarity: | 87/175 - (49%) |
Gaps: | 23/175 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 25 GSVAAVHTLDKIGKREIVGYGWNGTAC-----------------YADRVDYPLPAV-RFREPTNE 71
|.:.|...|..||||.| :.:.| ||||.|||||.| .....:..
Mouse 36 GRMLASRALSLIGKRAI-----STSVCLRAHGSVVKSEDYAFPTYADRRDYPLPDVAHVTMLSAS 95
Fly 72 INALRAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGVSLLFCAAAIWVAVLMNI 136
..||:.||:.||..||..|...|||..|.::.||:..|:.|||..:|:::.|......|.:....
Mouse 96 QKALKEKEKADWSSLSRDEKVQLYRIQFNESFAEMNRGTNEWKTVVGMAMFFIGFTALVLIWEKS 160
Fly 137 FVYDELPVTFDEEHQKAQLQRIIDLEINPVTGLTSKWDYENKKWK 181
:||..:|.|||.:....|.:|::|::.||:.|.::||||:..:||
Mouse 161 YVYGPIPHTFDRDWVAMQTKRMLDMKANPIQGFSAKWDYDKNEWK 205
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
COX4 | NP_001260612.1 |
COX4 |
50..181 |
CDD:281003 |
49/148 (33%) |
Cox4i1 | NP_034071.2 |
COX4 |
73..205 |
CDD:281003 |
48/131 (37%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C167841628 |
Domainoid |
1 |
1.000 |
106 |
1.000 |
Domainoid score |
I6576 |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
1 |
1.000 |
- |
- |
|
|
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
106 |
1.000 |
Inparanoid score |
I4913 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
1 |
1.010 |
- |
- |
|
QHG48902 |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1591226at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0002054 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
mtm8824 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_103849 |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10707 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4386 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X922 |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
14 | 13.940 |
|
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