DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10481 and VTC4

DIOPT Version :9

Sequence 1:NP_995731.1 Gene:CG10481 / 35273 FlyBaseID:FBgn0032827 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_012522.2 Gene:VTC4 / 853441 SGDID:S000003549 Length:721 Species:Saccharomyces cerevisiae


Alignment Length:208 Identity:47/208 - (22%)
Similarity:84/208 - (40%) Gaps:45/208 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFGKTLDNLMVPEWRYQYMNYNELKQMIRNAVEKAPSGSRPSNDVAIGYYRNFEELFFNSCRVE 65
            ||||:.|...::.::.|.|::|::||..:.:.:.| .:|.         :.:..|..|..|..:|
Yeast     1 MKFGEHLSKSLIRQYSYYYISYDDLKTELEDNLSK-NNGQ---------WTQELETDFLESLEIE 55

  Fly    66 LTKVNYFFAHKQAEAHRKLATLNYQLDRRRAQQDPRGSTASRGSASSWSRQPEGKRKFPPIKKLR 130
            |.||..|...|.:|..|::..:..|:.......|              |..|..:..|..:::  
Yeast    56 LDKVYTFCKVKHSEVFRRVKEVQEQVQHTVRLLD--------------SNNPPTQLDFEILEE-- 104

  Fly   131 LAMSEFYLSLIMLQNYQTLNMTAFRKICKKYDKNLKSEAGFAWYEKYVLKSTLAITL-------- 187
             .:|:....:..|..:..||.|.|:||.||:||    :.||      :||....:.|        
Yeast   105 -ELSDIIADVHDLAKFSRLNYTGFQKIIKKHDK----KTGF------ILKPVFQVRLDSKPFFKE 158

  Fly   188 QLDRMISTTENMY 200
            ..|.::.....:|
Yeast   159 NYDELVVKISQLY 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10481NP_995731.1 SPX_XPR1_like 2..163 CDD:269898 37/160 (23%)
SPX 3..163 CDD:281146 36/159 (23%)
EXS 267..601 CDD:281164
VTC4NP_012522.2 COG5036 1..497 CDD:227369 47/208 (23%)
DUF202 593..721 CDD:415817
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343553
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.569298 Normalized mean entropy S1995
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.790

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