DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and SR45

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001185014.1 Gene:SR45 / 838230 AraportID:AT1G16610 Length:425 Species:Arabidopsis thaliana


Alignment Length:117 Identity:20/117 - (17%)
Similarity:47/117 - (40%) Gaps:3/117 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
            ::|..:.|......:.|..|..:|..:|||:::.:..|......:|..::.::.:.....|...:
plant    95 QESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYM 159

  Fly    96 NGIKILDRTLRVDHVADYKPPKENEKMDEETLRLYMEGCAPKPQLQHIKTEK 147
            :|.:|..:.::.....   ||::......:.:....:..|||........||
plant   160 DGAQIDGKVVKATFTL---PPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEK 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 13/81 (16%)
SR45NP_001185014.1 RRM_RNPS1 100..172 CDD:409800 12/71 (17%)

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