DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Hnrnpab

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:XP_063126030.1 Gene:Hnrnpab / 83498 RGDID:69255 Length:332 Species:Rattus norvegicus


Alignment Length:121 Identity:33/121 - (27%)
Similarity:63/121 - (52%) Gaps:21/121 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL 95
            :|:..:||.|..:..::.||...|:::||||:..:..|..||:|:||.|:.::|..|..      
  Rat    72 EDAGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDSSSVE------ 130

  Fly    96 NGIKILDRTLRVDHVADYK--PPKENEKMDEETL-RLYMEGCAPKPQLQHIKTEKK 148
               |:||:.   :|..|.:  .||:...|.::.: ::::.|..|:      .||:|
  Rat   131 ---KVLDQK---EHRLDGRVIDPKKAMAMKKDPVKKIFVGGLNPE------ATEEK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 24/81 (30%)
HnrnpabXP_063126030.1 None

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