DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and AT5G03580

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_195978.1 Gene:AT5G03580 / 831785 AraportID:AT5G03580 Length:101 Species:Arabidopsis thaliana


Alignment Length:83 Identity:23/83 - (27%)
Similarity:45/83 - (54%) Gaps:7/83 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNG--- 97
            :::|.....::|..|..:||.:|:|:...|.:|.: |:|:||.|:.:|...|...|:.:::|   
plant    19 LYIANLDAQVSEEMLFLMFSDFGKVIRSVLAKDFR-GESRGFAFIEFESADSAGRAMLHMDGRLI 82

  Fly    98 ---IKILDRTLRVDHVAD 112
               |..:.||.:|:...|
plant    83 GQKILCVQRTPKVEDGRD 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 23/83 (28%)
AT5G03580NP_195978.1 RRM_SF 19..90 CDD:409669 19/71 (27%)

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