DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and NUC-L2

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_188491.1 Gene:NUC-L2 / 821392 AraportID:AT3G18610 Length:636 Species:Arabidopsis thaliana


Alignment Length:92 Identity:28/92 - (30%)
Similarity:45/92 - (48%) Gaps:10/92 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SAWIFVAGFPYTLTEG----DLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVD 93
            |..|:|.||..:|.|.    :|...||:.|||..:::..|.:||.|:||.::   |..|......
plant   478 SRTIYVRGFSSSLGEDEIKKELRSHFSKCGEVTRVHVPTDRETGASRGFAYI---DLTSGFDEAL 539

  Fly    94 NLNGIKILDRTLRVDHVADYKPPKENE 120
            .|:|.:|....:   ||.:.:|...:|
plant   540 QLSGSEIGGGNI---HVEESRPRDSDE 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 26/83 (31%)
NUC-L2NP_188491.1 RRM1_NUCLs 385..461 CDD:409884
RRM2_NUCLs 480..556 CDD:409885 25/81 (31%)
Blue background indicates that the domain is not in the aligned region.

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