DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and U11/U12-31K

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_187651.1 Gene:U11/U12-31K / 820203 AraportID:AT3G10400 Length:261 Species:Arabidopsis thaliana


Alignment Length:149 Identity:38/149 - (25%)
Similarity:68/149 - (45%) Gaps:15/149 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 PLTNMKNVLKLSEHELQHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIR 67
            |.:|.|:....|......||...  .:....:.::|:...::||..|:..:||.:|:|..:.:::
plant    28 PPSNPKHQPSSSAKSSAPGGGSG--GLAPSKSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLK 90

  Fly    68 DSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILD-RTLRVDHVADYKPPKE--NEKMDEETLRL 129
            |..|.:|:|..|:.|..:.....|..:::. |||: |.|.|...||.....|  .:::.::..|.
plant    91 DRHTRQSRGVAFVLYVSREDAAKAARSMDA-KILNGRKLTVSIAADNGRASEFIKKRVYKDKSRC 154

  Fly   130 YMEG--------CAPKPQL 140
            |..|        | ||.||
plant   155 YECGDEGHLSYEC-PKNQL 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 22/88 (25%)
U11/U12-31KNP_187651.1 RRM_ZCRB1 56..131 CDD:409827 20/75 (27%)
PTZ00368 154..>173 CDD:173561 7/20 (35%)

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