DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and AT3G07810

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_850539.1 Gene:AT3G07810 / 819972 AraportID:AT3G07810 Length:495 Species:Arabidopsis thaliana


Alignment Length:97 Identity:23/97 - (23%)
Similarity:49/97 - (50%) Gaps:12/97 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 MYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAV- 92
            |..|:..:|:.|..:...|..|...||.:|||:...:::|..||:::||.|:.:.|.....:.: 
plant     1 MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVIT 65

  Fly    93 --DNLNGIKILDRTLRVDHVADYKPPKENEKM 122
              .|::| ::::....|        |::::.|
plant    66 EKHNIDG-RLVEAKKAV--------PRDDQNM 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 21/86 (24%)
AT3G07810NP_850539.1 RRM_SF 8..78 CDD:473069 18/70 (26%)
RRM2_Hrp1p 109..186 CDD:409767
Blue background indicates that the domain is not in the aligned region.

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