DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and tia1

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_997793.1 Gene:tia1 / 793165 ZFINID:ZDB-GENE-030131-1506 Length:386 Species:Danio rerio


Alignment Length:124 Identity:30/124 - (24%)
Similarity:56/124 - (45%) Gaps:4/124 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NVLKLSEHELQHGGKKSWHDMYKDSA---WIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSK 70
            |..|:...|::.....|.....||::   .:||......:|..|:...|:.:|.:.:..:::|..
Zfish    68 NGRKIMGKEVKVNWATSPSSQKKDTSNHFHVFVGDLSPEITTDDIRAAFAPFGRISDARVVKDMA 132

  Fly    71 TGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENEKMDEETLRL 129
            ||||||:.|:.:.::.....|:..:.|..:..|.:|.:. |..|||......:..|..|
Zfish   133 TGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNW-ATRKPPAPKATYETNTKHL 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 22/90 (24%)
tia1NP_997793.1 RRM1_TIA1 9..82 CDD:410027 3/13 (23%)
RRM2_TIA1 94..171 CDD:410030 18/76 (24%)
RRM3_TIA1 204..275 CDD:410032
Blue background indicates that the domain is not in the aligned region.

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