DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10466 and rbm4.2

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_955971.2 Gene:rbm4.2 / 557528 ZFINID:ZDB-GENE-030131-3019 Length:384 Species:Danio rerio


Alignment Length:121 Identity:23/121 - (19%)
Similarity:48/121 - (39%) Gaps:25/121 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            ||:.....|.|..||..:||::|.|...:::        |.:.|:..:.::....|:..|:..::
Zfish     4 IFIGNLSPTSTADDLRSLFSEFGIVKECDVL--------KNYGFVHMDSKKEAEAAIRKLHHYEL 60

  Fly   101 LDRTLRVD------------HVADYKPPKENEKMDEETLRLYMEGCAPKPQLQHIK 144
            ..:.:.|:            ||::......|::     ||...|...|..:...:|
Zfish    61 KGQAINVELSKGKPRGSTKLHVSNISSGCTNQE-----LRAKFEEYGPVVECDIVK 111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 17/88 (19%)
rbm4.2NP_955971.2 None

Return to query results.
Submit another query.