DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Tra2a

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001119768.2 Gene:Tra2a / 500116 RGDID:1562563 Length:282 Species:Rattus norvegicus


Alignment Length:108 Identity:32/108 - (29%)
Similarity:59/108 - (54%) Gaps:13/108 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 NPLTNMKNVLKLSEHELQHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLI 66
            :|::|.:          :|.|.::..|   .:..:.|.|.....||.||..|||:||.:..:|::
  Rat    98 SPMSNRR----------RHTGSRANPD---PNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVV 149

  Fly    67 RDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKILDRTLRVDH 109
            .|.:||:|:||.|:.:|....:..|::..||:::..|.:|||:
  Rat   150 YDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDY 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 28/85 (33%)
Tra2aNP_001119768.2 RRM_TRA2 116..195 CDD:409798 27/77 (35%)

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