DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and LS2

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_611769.2 Gene:LS2 / 37681 FlyBaseID:FBgn0034834 Length:449 Species:Drosophila melanogaster


Alignment Length:72 Identity:25/72 - (34%)
Similarity:39/72 - (54%) Gaps:0/72 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            |:|.|.|..|.:..:..:...:||:..:||:.|:.|..:|||.|..|.|...|..|:..|:|:.:
  Fly   244 IYVGGLPTCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAIAGLHGMLL 308

  Fly   101 LDRTLRV 107
            .||.|.|
  Fly   309 GDRRLVV 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 25/72 (35%)
LS2NP_611769.2 U2AF_lg 35..447 CDD:273727 25/72 (35%)

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