DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Tial1

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001013211.1 Gene:Tial1 / 361655 RGDID:1595845 Length:392 Species:Rattus norvegicus


Alignment Length:117 Identity:29/117 - (24%)
Similarity:56/117 - (47%) Gaps:8/117 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 KKSW----HDMYKDSA---WIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFL 80
            |.:|    ....||::   .:||......:|..|:...|:.:|::.:..:::|..||||||:.|:
  Rat    96 KVNWATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFV 160

  Fly    81 CYEDQRSTVLAVDNLNGIKILDRTLRVDHVADYKPPKENEKMDEETLRLYME 132
            .:.::.....|:.::.|..:..|.:|.:. |..|||......:..|.:|..|
  Rat   161 SFYNKLDAENAIVHMGGQWLGGRQIRTNW-ATRKPPAPKSTQETNTKQLRFE 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 22/94 (23%)
Tial1NP_001013211.1 RRM1_TIAR 10..107 CDD:410028 2/10 (20%)
RRM2_TIAR 113..192 CDD:410029 19/79 (24%)
RRM3_TIAR 222..294 CDD:241064
Blue background indicates that the domain is not in the aligned region.

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