DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Caper

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_609095.1 Gene:Caper / 33989 FlyBaseID:FBgn0031883 Length:594 Species:Drosophila melanogaster


Alignment Length:94 Identity:28/94 - (29%)
Similarity:51/94 - (54%) Gaps:8/94 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            ::|....:.:||..|..:|..:|::..|.||.|::||:|||:.|:.|.:......|::.|||.::
  Fly   337 LYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLNGFEL 401

  Fly   101 LDRTLRVDHVADYKPPKENEKMDEETLRL 129
            ..|.::|.:|        .|::|..|..|
  Fly   402 AGRLMKVGNV--------TERLDMNTTSL 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 24/76 (32%)
CaperNP_609095.1 SF-CC1 213..578 CDD:273721 28/94 (30%)

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