DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and rbm14a

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001108616.1 Gene:rbm14a / 323721 ZFINID:ZDB-GENE-050522-496 Length:471 Species:Danio rerio


Alignment Length:126 Identity:26/126 - (20%)
Similarity:55/126 - (43%) Gaps:22/126 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 DSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLN 96
            :|..:||.....:.:..||..:||.||:|::.:.:: :|.....|:.|:..|.:.....|::.|:
Zfish    81 NSTKVFVGNLCASCSVEDLYDLFSPYGKVLDCDKVK-TKPSSLTGYAFVYMEHKEDAEQAIEGLH 144

  Fly    97 GIKILDRTLRVDHVADYKPPKENEKMDEETLRLYMEGCAP-----------KPQLQHIKTE 146
            |...:.|.|.|          |..|:.:.|.::....|..           :|.::|.:::
Zfish   145 GTTFMGRPLAV----------ELSKVQQSTNKVPCASCGAHGHFAGECPINRPPMEHHQSQ 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 20/80 (25%)
rbm14aNP_001108616.1 RRM_SF 7..75 CDD:473069
RRM_SF 84..156 CDD:473069 19/82 (23%)
Blue background indicates that the domain is not in the aligned region.

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