DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Eif4h

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_001006958.1 Gene:Eif4h / 288599 RGDID:1359222 Length:248 Species:Rattus norvegicus


Alignment Length:94 Identity:28/94 - (29%)
Similarity:48/94 - (51%) Gaps:21/94 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 FVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNL------ 95
            :|...|:...:||:..:|... .:.::.|:||..|.|.||||::.:::       ||:|      
  Rat    45 YVGNLPFNTVQGDIDAIFKDL-SIRSVRLVRDKDTDKFKGFCYVEFDE-------VDSLKEALTY 101

  Fly    96 NGIKILDRTLRVDHVADYKPPKENEKMDE 124
            :|..:.||:|||| :|      |..|.|:
  Rat   102 DGALLGDRSLRVD-IA------EGRKQDK 123

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 25/81 (31%)
Eif4hNP_001006958.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..41
RRM_eIF4H 37..120 CDD:409835 26/89 (29%)
SF-CC1 <40..>227 CDD:273721 28/94 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..248 1/3 (33%)
Blue background indicates that the domain is not in the aligned region.

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