DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and gar2

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_593531.1 Gene:gar2 / 2542869 PomBaseID:SPAC140.02 Length:500 Species:Schizosaccharomyces pombe


Alignment Length:73 Identity:24/73 - (32%)
Similarity:38/73 - (52%) Gaps:1/73 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            :||....:..||.||...|...|::.:|.|..|.::|:.|||.::.:.|..|....|: :||..|
pombe   368 VFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVTFSDIDSAKKCVE-MNGHFI 431

  Fly   101 LDRTLRVD 108
            ..|..|:|
pombe   432 AGRPCRLD 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 24/73 (33%)
gar2NP_593531.1 PRK13808 <2..64 CDD:172341
RRM_SF 264..339 CDD:473069
RRM2_gar2 368..439 CDD:409882 23/71 (32%)
Blue background indicates that the domain is not in the aligned region.

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