DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and nop4

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_596114.1 Gene:nop4 / 2540871 PomBaseID:SPBC4F6.14 Length:674 Species:Schizosaccharomyces pombe


Alignment Length:90 Identity:20/90 - (22%)
Similarity:43/90 - (47%) Gaps:4/90 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 IFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGIKI 100
            :||....:...:.||...||..|.:.:..::.:.:||:::|:.|:.:........|...|...|:
pombe     7 LFVRNLAFQTKQDDLTNFFSDVGPIKHAVVVTNPETGENRGYGFVTFSMLEDAQRAAKELKNKKL 71

  Fly   101 LDRTLRVDHVADYKPPKENEKMDEE 125
            ..|.||:    |:..|::..::|.:
pombe    72 HGRILRL----DFATPRKRSEVDTD 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 17/76 (22%)
nop4NP_596114.1 RRM1_Nop4p 5..84 CDD:410075 18/80 (23%)
RRM2_Nop4p 107..189 CDD:410076
RRM3_Nop4p 276..390 CDD:410077
RRM4_Nop4p 458..614 CDD:410078
Blue background indicates that the domain is not in the aligned region.

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