DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and Tra2b

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_033212.1 Gene:Tra2b / 20462 MGIID:106016 Length:288 Species:Mus musculus


Alignment Length:97 Identity:28/97 - (28%)
Similarity:53/97 - (54%) Gaps:3/97 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 QHGGKKSWHDMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYE 83
            :|.|.::..|   .:..:.|.|.....||.||..|||:||.:.:::::.|.::.:|:||.|:.:|
Mouse   106 RHVGNRANPD---PNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFE 167

  Fly    84 DQRSTVLAVDNLNGIKILDRTLRVDHVADYKP 115
            :......|.:..||:::..|.:|||.....:|
Mouse   168 NVDDAKEAKERANGMELDGRRIRVDFSITKRP 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 25/87 (29%)
Tra2bNP_033212.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..114 2/7 (29%)
RRM_TRA2 117..196 CDD:409798 24/78 (31%)
Linker 193..230 1/7 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 196..225 1/4 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 242..288
Blue background indicates that the domain is not in the aligned region.

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