DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and rsp-6

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_741446.1 Gene:rsp-6 / 177566 WormBaseID:WBGene00004703 Length:179 Species:Caenorhabditis elegans


Alignment Length:75 Identity:22/75 - (29%)
Similarity:37/75 - (49%) Gaps:5/75 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 AWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGFCFLCYEDQRSTVLAVDNLNGI 98
            |.::|.|.|...|..:|..:|.::|.:..:.:.|     :..||.|:.|:|.|....||..|:|.
 Worm     3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVRDAEDAVRALDGS 62

  Fly    99 KILDRTLRVD 108
            :|.....||:
 Worm    63 RICGVRARVE 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 22/75 (29%)
rsp-6NP_741446.1 RRM_SRSF3_like 4..75 CDD:409808 21/74 (28%)

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