DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10466 and rnp-7

DIOPT Version :10

Sequence 1:NP_610003.1 Gene:CG10466 / 35268 FlyBaseID:FBgn0032822 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_498565.2 Gene:rnp-7 / 176002 WormBaseID:WBGene00004390 Length:332 Species:Caenorhabditis elegans


Alignment Length:97 Identity:26/97 - (26%)
Similarity:45/97 - (46%) Gaps:13/97 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 GKKSWH---------DMYKDSAWIFVAGFPYTLTEGDLVCVFSQYGEVVNINLIRDSKTGKSKGF 77
            |..:|:         |.|:.   :||....|..:|..|...|..||::..:.::.| :.||.:|:
 Worm    86 GIATWNPAENPRASEDPYRT---LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGY 146

  Fly    78 CFLCYEDQRSTVLAVDNLNGIKILDRTLRVDH 109
            .|:.|.|:.....|....:|||:..:.|.||:
 Worm   147 AFIEYSDKAEMHTAYKKADGIKVDGKRLVVDY 178

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10466NP_610003.1 RRM_ist3_like 25..113 CDD:409845 25/94 (27%)
rnp-7NP_498565.2 U1snRNP70_N 4..95 CDD:432406 2/8 (25%)
RRM_snRNP70 103..192 CDD:409682 23/80 (29%)

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